perses.rjmc.topology\_proposal.NaphthaleneProposalEngine ======================================================== .. currentmodule:: perses.rjmc.topology_proposal .. autoclass:: NaphthaleneProposalEngine .. automethod:: __init__ .. rubric:: Methods .. autosummary:: ~NaphthaleneProposalEngine.__init__ ~NaphthaleneProposalEngine.canonicalize_smiles ~NaphthaleneProposalEngine.clean_molecule_list ~NaphthaleneProposalEngine.compute_state_key ~NaphthaleneProposalEngine.propose .. rubric:: Attributes .. autosummary:: ~NaphthaleneProposalEngine.chemical_state_list