perses.analysis.Analysis
========================

.. currentmodule:: perses.analysis

.. autoclass:: Analysis

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~Analysis.__init__
      ~Analysis.extract_logP_values
      ~Analysis.extract_state_trajectory
      ~Analysis.get_environments
      ~Analysis.get_free_energies
      ~Analysis.plot_chemical_trajectory
      ~Analysis.plot_exen_logp_components
      ~Analysis.plot_ncmc_work_distributions
      ~Analysis.plot_ncmc_work_old
      ~Analysis.plot_sams_weights
      ~Analysis.plot_work_trajectories
      ~Analysis.write_trajectory